Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792667.1_cds_XP_016513506.1_2528
CDS Infomation

[gene=LOC107830453] [db_xref=GeneID:107830453] [protein=geranylgeranyl diphosphate reductase, chloroplastic-like isoform X3] [protein_id=XP_016513506.1] [location=join(60418..60607,60814..62021)] [gbkey=CDS]
Sequence

ATGGCTTCCATTGCTCTCAAAACTTTCACCGGCCTCCGTCAATCCTCGCCGGAAAACAAT
TCCATTACCCTCTCTAAATCCCTCCCCTTAACCCAAACCCACCGTAGGCTCCGAATCAAT
GCTTCCAAATCCAGCCCAAGAGTCAACGGCCGCAATCTTCGTGTTGCGGTGGTGGGCGGT
GGTCCTGCTGCTGGTGGCGCCGCCGCTGAAACACTCGCCAAGGGCGGAATTGAAACCTTC
TTAATCGAACGCAAAATGGACAACTGCAAACCATGTGGTGGGGCCATCCCTCTTTGCATG
GTGGGAGAATTTGACCTCCCTTTGGATATCATTGACCGGAAAGTCACAAAGATGAAGATG
ATTTCCCCGTCCAACGTTGCCGTCGATATCGGACAGACCTTAAAGCCTCACGAGTACATC
GGTATGGTGCGCCGCGAAGTACTCGATGCTTATCTCCGTGACCGTGCTGCTGAAGCCGGA
GCCTCTGTTCTCAACGGCTTGTTCCTCAAAATGGACATGCCCAAAGCCCCAAACGCACCT
TACGTCCTTCACTACACAGCTTACGACTCCAAAACTAACGGCGCAGGAGAGAAGCGCACC
CTGGAAGTTGACGCCGTTATCGGCGCTGACGGCGCAAATTCCCGTGTCGCAAAATCCATC
AACGCCGGTGACTACGAGTATGCTATTGCTTTCCAAGAAAGGATTAGAATTTCAGATGAT
AAAATGAAGTATTACGAGAATTTAGCTGAAATGTACGTCGGAGATGACGTGTCCCCTGAT
TTTTACGGGTGGGTTTTCCCCAAGTGTGACCACGTTGCCGTTGGCACTGGCACAGTCACC
CACAAAGCTGACATTAAGAAATTCCAGCTAGCTACAAGACTGAGAGCCGATTCCAAAATC
ACTGGAGGAAAAATTATCCGGGTGGAGGCCCACCCGATTCCAGAACACCCTAGACCGAGA
AGATTACAAGACAGAGTTGCATTGGTTGGTGATGCAGCAGGGTACGTGACAAAATGTTCA
GGCGAAGGGATTTACTTCGCGGCAAAGAGCGGACGTATGTGTGCTGAAGCAATTGTTGAG
GGTTCAGAAATGGGAAAGAGAATGGTGGACGAGAGTGATTTGAGGAAGTATTTGGAGAAA
TGGGACAAGACTTATTGGCCAACGTACAAGGTGCTTGATATATTGCAGAAAGTATTTTAC
AGGTCGAATCCGGCGAGGGAGGCTTTTGTTGAAATGTGCGCAGATGAGTATGTGCAGAAG
ATGACATTTGACAGCTATTTGTACAAGAAAGTGGCACCAGGAAACCCCATTGAAGACTTG
AAGCTTGCTGTGAATACCATTGGAAGTTTGGTGAGAGCTAATGCACTAAGAAGGGAAATG
GACAAACTCAGAGTATAA

Peptide Sequence

PEP ID

XP_016513506.1
PEP Infomation

PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like isoform X3 [Nicotiana tabacum]
Sequence

MASIALKTFTGLRQSSPENNSITLSKSLPLTQTHRRLRINASKSSPRVNGRNLRVAVVGG
GPAAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM
ISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAP
YVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDD
KMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKI
TGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE
GSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQK
MTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLRV

Transcript Sequence

Gene sequence data has not been registered.